CDS

Accession Number TCMCG017C23670
gbkey CDS
Protein Id OMO75519.1
Location complement(join(47974..48168,48259..48357,48555..48590,49107..49229,49566..49654,49769..49881,49979..50121,50256..50482,50591..50717,50964..51001,51379..51403,51599..51673))
GeneID InterPro:IPR006046
Organism Corchorus olitorius
locus_tag COLO4_26062

Protein

Length 429aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01019204.1
Definition Alpha amylase [Corchorus olitorius]
Locus_tag COLO4_26062

EGGNOG-MAPPER Annotation

COG_category G
Description Belongs to the glycosyl hydrolase 13 family
KEGG_TC -
KEGG_Module -
KEGG_Reaction R02108        [VIEW IN KEGG]
R02112        [VIEW IN KEGG]
R11262        [VIEW IN KEGG]
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01176        [VIEW IN KEGG]
EC 3.2.1.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00500        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko04973        [VIEW IN KEGG]
map00500        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map04973        [VIEW IN KEGG]
GOs GO:0000272        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004553        [VIEW IN EMBL-EBI]
GO:0004556        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005975        [VIEW IN EMBL-EBI]
GO:0005976        [VIEW IN EMBL-EBI]
GO:0005982        [VIEW IN EMBL-EBI]
GO:0005983        [VIEW IN EMBL-EBI]
GO:0005984        [VIEW IN EMBL-EBI]
GO:0005985        [VIEW IN EMBL-EBI]
GO:0005987        [VIEW IN EMBL-EBI]
GO:0006073        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009251        [VIEW IN EMBL-EBI]
GO:0009311        [VIEW IN EMBL-EBI]
GO:0009313        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016052        [VIEW IN EMBL-EBI]
GO:0016160        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016798        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044042        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044247        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044262        [VIEW IN EMBL-EBI]
GO:0044264        [VIEW IN EMBL-EBI]
GO:0044275        [VIEW IN EMBL-EBI]
GO:0046352        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCAGGGTATCTCAGTGCTCCAGTTTCCACGATCTAGCCTCAAATTTGGGCAGCAACCAATTGAGTTGACATGGACTGTTGAAGAGAACATTGATCTAGGTGCTGTGTTGCGCAGTGGAAGAGAAATCCTTTTGCAGGGTTTTAACTGGGAGTCTCACAAATATGACTGGTGGAGAAACCTAGAAAGGAAAGTTCCCAACATTGCAAAATCTGGGTTTACATCCGTATGGTTGCCACCAGCATATCATGGCATAGCACCAGAAGGGTACCTTCCCCAGAACCTTTATTCTCTCAATTCTTCATATGGCTCTGAGCAGCTGTTGAAAGCTTTACTCCAAAAACTGAAGCAGTACAAAGTTAGAGCGATGGCCGACATAGTAATCAATCATCGTGTTGGGACTACTCAAGGACATGGAGGAATGTATAACCGTTATGATGGAATTCCACTAGCATGGGATGAGCATGCTGTCACATCTTGTACTGGTGGATTGGGTACTCGAAGCACTGGAGAAAACTTTCATGGGGTTCCAAATGTTGATCACACCCAATACTTTGTACGTAAGGACATCATAGGATGGTTGAAGTGGCTACGCAGTGTTGGATTTCAAGATTTTCGCTTTGATTTTGCAAGGGGTTACTCTGCGAAATATGTCAAAGAATACATTGAAGGAGCAAAGCCTATATTTTCTGTTGGGGAGTATTGGGATTCTTGCACCTACAATGGATATGGATTAGACTACAACCAAGACAGCCATAGACAAAGGATCATTAATTGGATTGATGCCACAGGACAGCTTTCAACTGCATTTGACTTTACAACTAAGGGAATTCTTCAGGAAGCTGTGAAGGGGCAATTCTGGCGCCTGCGTGACCCTCAAGGGAAGCCCCCAGGTGTAATGGGGTGGTGGCCCTCGAGGGCAGTCACATTTTTGGATAATCATGACACAGGCTCAACACAGGCTCATTGGCCTTTCCCCTCAAATCATATTATGGAGGGTTATGCATACACACTTACACATCCAGGAATACCCTCAGTTTTTTATGATCACTTCTACGATTGGGGTAATTCCATTCACGACCAAATTGTTAAGCTGATTGACATTAGAAAGCGTCAAGATATTCACAGCCGGTCATCTGTCAGAATCCTGGAGGCCAAAAACAACCTCTATTCCGCAATAATTGGAGAAAAAGTATGCATGAAGATTGGGGATGGTTCATGGTGTCCAACTGGCAGAGAGTGGACATTAGCAACATCTGGAGAGAGATATGCAGTATGGCAAAAGCAATGA
Protein:  
MQGISVLQFPRSSLKFGQQPIELTWTVEENIDLGAVLRSGREILLQGFNWESHKYDWWRNLERKVPNIAKSGFTSVWLPPAYHGIAPEGYLPQNLYSLNSSYGSEQLLKALLQKLKQYKVRAMADIVINHRVGTTQGHGGMYNRYDGIPLAWDEHAVTSCTGGLGTRSTGENFHGVPNVDHTQYFVRKDIIGWLKWLRSVGFQDFRFDFARGYSAKYVKEYIEGAKPIFSVGEYWDSCTYNGYGLDYNQDSHRQRIINWIDATGQLSTAFDFTTKGILQEAVKGQFWRLRDPQGKPPGVMGWWPSRAVTFLDNHDTGSTQAHWPFPSNHIMEGYAYTLTHPGIPSVFYDHFYDWGNSIHDQIVKLIDIRKRQDIHSRSSVRILEAKNNLYSAIIGEKVCMKIGDGSWCPTGREWTLATSGERYAVWQKQ